BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H03LP1|AL428796
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1579 1733 0.0
>3x_Contig1579
Length = 11264
Score = 1733 bits (874), Expect = 0.0
Identities = 884/886 (99%), Gaps = 1/886 (0%)
Strand = Plus / Plus
Query: 5 acaaatttcatttgaaccaaacatagatgctgatcaactgagaataaatcgtcctccaca 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3037 acaaatttcatttgaaccaaatatagatgctgatcaactgagaataaatcgtcctccaca 3096
Query: 65 taaccgtctttatcccataaaggtagtcgaagaactttaggaaccacttccggaatcttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3097 taaccgtctttatcccataaaggtagtcgaagaactttaggaaccacttccggaatcttg 3156
Query: 125 gattgaaacaaaattttgttttgagcattttcaaggatgtgaccaaaagctatacttaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3157 gattgaaacaaaattttgttttgagcattttcaaggatgtgaccaaaagctatacttaat 3216
Query: 185 gatttcgtttcagtgaaagcgagaggtttcgcacattttgttttattgatttctaagata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3217 gatttcgtttcagtgaaagcgagaggtttcgcacattttgttttattgatttctaagata 3276
Query: 245 tcccagatcttgtcgatcttttccgaaagatcgatcttggtgtctttaatttcttgattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3277 tcccagatcttgtcgatcttttccgaaagatcgatcttggtgtctttaatttcttgattg 3336
Query: 305 atggcaacaggctgctgaattctgtgccacgactgttttcttgctacccaattgatccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3337 atggcaacaggctgctgaattctgtgccacgactgttttcttgctacccaattgatccat 3396
Query: 365 tcgtaattagttaatgggtactgttcagttttttctcctccatcataaggtactaatatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3397 tcgtaattagttaatgggtactgttcagttttttctcctccatcataaggtactaatatc 3456
Query: 425 tccgtagtttgagggttataattcaaaacccacagcaacaatgaatttattatattcatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 tccgtagtttgagggttataattcaaaacccacagcaacaatgaatttattatattcatg 3516
Query: 485 tttttacggccaatagtactgattttatatttggaatcgtcagtgatttctacataactg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 tttttacggccaatagtactgattttatatttggaatcgtcagtgatttctacataactg 3576
Query: 545 gatgattgagtttgcatcaaagcgatgatttcctctggcgtcatgtgatggacaccatcg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 gatgattgagtttgcatcaaagcgatgatttcctctggcgtcatgtgatggacaccatcg 3636
Query: 605 atttgactgtgatctttaatgaactcttcaattg-aaaatcatcggaaacaacgttctcc 663
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3637 atttgactgtgatctttaatgaactcttcaattgaaaaatcatcggaaacaacgttctcc 3696
Query: 664 aagatcctggaaatggacacttcaacgtatttgaagatatgggaagtagcacgaaccaca 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 aagatcctggaaatggacacttcaacgtatttgaagatatgggaagtagcacgaaccaca 3756
Query: 724 agtttattttcatcaataacaacagcaatcgtcgcaccaattctagccaagttttgtagg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 agtttattttcatcaataacaacagcaatcgtcgcaccaattctagccaagttttgtagg 3816
Query: 784 attctaccatttttagtcaatagtaatagataaatgtctcttgtttcaagagaaatttcg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 attctaccatttttagtcaatagtaatagataaatgtctcttgtttcaagagaaatttcg 3876
Query: 844 ttttccacaatcaaatcgtcatgttcacttttgttataatcgattg 889
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 ttttccacaatcaaatcgtcatgttcacttttgttataatcgattg 3922
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8256
Number of Sequences: 1807
Number of extensions: 8256
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)